Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891699.1_cds_XP_016446555.1_41401
CDS Infomation

[gene=LOC107771644] [db_xref=GeneID:107771644] [protein=T-complex protein 1 subunit alpha] [protein_id=XP_016446555.1] [location=join(13850..13922,14028..14092,15509..15598,15691..15777,15884..15943,16048..16098,16989..17084,17979..18044,18224..18441,18988..19084,19692..19778,20658..20792,20992..21096,21622..21750,21844..21947,23078..23168,23244..23327)] [gbkey=CDS]
Sequence

ATGGCGTATCAAGGACAAACTCTTGATATTTCCGGCGACCGCCAGTCCGGTCAGGATGTT
CGCACCCAAAATGTGACTGCATGTCAAGCAGTTGCTAACATTGTCAAATCTTCGCTTGGA
CCTGTTGGCCTCGATAAGATGCTTGTTGATGATATTGGCGACGTAACAATTACTAATGAC
GGTGCCACTATTCTGAGGATGTTAGAAGTTGAGCATCCAGCTGCCAAGGTTCTTGTTGAG
TTGGCTGAACTCCAAGATCGAGAAGTTGGTGATGGAACAACCTCAGTCGTTATTATAGCT
GCAGAGTTGCTTAAGGGAGCAAATGAGTTGGTGAGGCACAAAATTCATCCGACCTCGATA
ATCAGCGGATATAGGCTAGCAATGAGGGAAGCGTGCAAATATGTCGAAGAAAAGTTGGCT
GTTAAGGTTGATAAACTTGGAAAAGATTCTCTTGTAAACTGTGCCAAGACAAGCATGTCA
TCAAAGTTGATAGCAGCTGATAGTGACTTCTTTGCTAATATGGTTGTTGAAGCAGTACAG
GCAGTCAAGATGACTAATGCGAGGGGTGAAGTTAAATATCCTATCAAGGGTATTAATTTA
CTTAAAGCACATGGGAAAAGTGCAAAAGATAGCTATCTATTGAAGGGTTATGCTCTGAAT
ACTGGCCGTGCTGCCCAAGGAATGCCACTGAGAGTTTCGCCTGCACGGATTGCTTGTCTT
GACTTCAATCTTCAAAAGACAAAAATGCAGATGGGTGTTCAAGTATTGGTAACTGATCCT
CGAGAGCTTGAGAGGATTCGCCAAAGAGAAGCTGACATGACAAAAGAACGGATTCAGAAA
CTTTTGAGTGCGGGAGCCAATGTGGTCCTGACTTCAAAAGGGATTGATGACATGGCACTG
AAGTACTTTGTGGAAGCTGGTGCCATTGCAGTTAGACGTGTACGCAAAGAGGATTTGCGC
CATGTTGCCAAGGCAACTGGCGCAACTGTGGTCTCAACATTTGCGGATATGGAAGGAGAA
GAAACTTTTGAACCATCACTTCTTGGACATGCTGAAGAGGTAGTGGAGGAGCGGATTGCT
GATGATGATGTGATTATGGTAAAAGGAACCAAAAACTCAAGTTCGGTTTCATTAATACTT
AGAGGTGCAAATGACTTTATGCTTGATGAGATGGAGAGGGCCCTCCATGATGCTTTATGC
ATTGTGAAGAGAACACTTGAGTCGACAACTGTTGTTGCTGGTGGTGGGGCTGTTGAGGCT
GCTTTATGTGTCTACTTGGAGTACCTAGCTACTACCCTTGGGTCAAGGGAGCAGCTGGCT
ATTGCACAATTTGCTGAATCCTTACTTGTCATACCTAAGGTTCTTGCAAATAATGCTGCA
AAAGATTCCAGTGACTTGGTATCTAAACTACGTTCATGTCACTACCTTGCACAAACCAAA
GCTGATAAGAAGCATCTATCAAGCATGGGACTGGATCTAGCGAAGGGCACTGTGCGAAAT
AACTTGGAAGCTGGAGTGATTGAGCCTGCAATGAGCAAAGTAAAAATAATACAGTTTGCT
ACGGAAGCAGCTATTACTATTCTGAGAATCGATGACATGATAAGGCTTGTCAAAGATGAG
AGCCAGAATGATGATTAG

Peptide Sequence

PEP ID

XP_016446555.1
PEP Infomation

PREDICTED: T-complex protein 1 subunit alpha [Nicotiana tabacum]
Sequence

MAYQGQTLDISGDRQSGQDVRTQNVTACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND
GATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKGANELVRHKIHPTSI
ISGYRLAMREACKYVEEKLAVKVDKLGKDSLVNCAKTSMSSKLIAADSDFFANMVVEAVQ
AVKMTNARGEVKYPIKGINLLKAHGKSAKDSYLLKGYALNTGRAAQGMPLRVSPARIACL
DFNLQKTKMQMGVQVLVTDPRELERIRQREADMTKERIQKLLSAGANVVLTSKGIDDMAL
KYFVEAGAIAVRRVRKEDLRHVAKATGATVVSTFADMEGEETFEPSLLGHAEEVVEERIA
DDDVIMVKGTKNSSSVSLILRGANDFMLDEMERALHDALCIVKRTLESTTVVAGGGAVEA
ALCVYLEYLATTLGSREQLAIAQFAESLLVIPKVLANNAAKDSSDLVSKLRSCHYLAQTK
ADKKHLSSMGLDLAKGTVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIRLVKDE
SQNDD

Transcript Sequence

Gene sequence data has not been registered.